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The Animal Quantitative Trait Loci Database (Animal QTLdb)

dataset
posted on 2024-02-09, 17:46 authored by Zhiliang Hu

The Animal Quantitative Trait Loci (QTL) Database (Animal QTLdb) strives to collect all publicly available trait mapping data, i.e. QTL (phenotype/expression, eQTL), candidate gene and association data (GWAS), and copy number variations (CNV) mapped to livestock animal genomes, in order to facilitate locating and comparing discoveries within and between species. New data and database tools are continually developed to align various trait mapping data to map-based genome features such as annotated genes.


Resources in this dataset:

Funding

USDA

History

Data contact name

Hu, Zhiliang

Data contact email

zhu@iastate.edu

Publisher

National Animal Genome Research Program (NAGRP)

Intended use

Published data curated for data comparisons and meta-analysis

Temporal Extent Start Date

2022-04-29

Theme

  • Not specified

Geographic Coverage

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Geographic location - description

Iowa State University

ISO Topic Category

  • biota

Ag Data Commons Group

  • AgBioData

National Agricultural Library Thesaurus terms

animals; quantitative trait loci; databases; phenotype; genes; livestock; swine; cattle; chickens; chromosome mapping; bacterial artificial chromosomes; single nucleotide polymorphism; humans; researchers

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Hu, Zhiliang (2017). The Animal Quantitative Trait Loci Database (Animal QTLdb). National Animal Genome Research Program (NAGRP).

Usage metrics

    Categories

    Keywords

    QTL SNP association livestock traits

    Licence

    U.S. Public Domain

    Exports

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