pgen.1009865.s011.xlsx (9.24 kB)
Summary of chromatin accessibility consensus peaks and genes for SGBS differentiation timepoints.
dataset
posted on 2021-10-26, 17:34 authored by Hannah J. Perrin, Kevin W. Currin, Swarooparani Vadlamudi, Gautam K. Pandey, Kenneth K. Ng, Martin Wabitsch, Markku Laakso, Michael I. Love, Karen L. MohlkeConsensus peaks were defined as the union of chromatin accessibility region accessible in majority of replicates for timepoint, overlapping by 1 or more base pairs and consensus genes were defined as those expressed in majority of replicates for timepoint (see Methods for more information).
(XLSX)
History
Usage metrics
Categories
Keywords
wide association studyrelevant cell contextslog2 fold changehuman cell modelexhibited allelic differencesdemonstrated allelic imbalanceshowed significant enrichmentadipose eqtl variantsone gwas locusidentified 582 variantsdependent peak linkedidentify regulatory elementsamong gwas locidependent peaks linkeddependent gene expressionidentify variantsdependent peaksregulatory variantsregulatory elementsmodest enrichmentidentified 58gene expressiondependent effectsdependent genesregulatory mechanismgwas signalgwas locilinked contexttranscriptional activitytimepoint comparisonsresults demonstratepalmitoleic acidhip ratioguide identificationguide discoverydays 4consensus mapcardiometabolic traitsc dataaid identification09 ).
Licence
Exports
RefWorks
BibTeX
Ref. manager
Endnote
DataCite
NLM
DC