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Rubus argutus cultivar:Hillquist Genome sequencing and assembly

dataset

posted on 2024-06-11, 06:51 authored by North Carolina State University, Margaret Leigh Worthington, Hamid Ashrafi

Chromosome-length assembly and annotation of the diploid blackberry germplasm accession Hillquist (R. argutus Link.) along with raw sequence reads used to in the project. Hillquist is the only known source of primocane-fruiting (annual-fruiting) in tetraploid fresh-market blackberry breeding programs and is represented in the pedigree of many important cultivars worldwide. Hillquist (PI 553951) was sourced from the USDA National Clonal Germplasm Repository (NCGR).

Funding

National Institute of Food and Agriculture, 2018-06274 USDA-NIFA

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-04-22

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA830911

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA830911 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Rubus argutus eEukaryotes genome sequencing and assembly raw sequence reads genome sequencing assembly

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