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RNA sequencing study of Phaseolus vulgaris interaction with NAD+ againest Halo Blight

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posted on 2024-06-11, 06:53 authored by UNIVERSITY OF FLORIDA

To further investigate the function of NAD+ in snap bean against halo blight caused by Pseudomonas syringae pv. phaseolicola, we investigated NAD+-induced transcriptomic changes using the Illumina RNA-seq technology. Total RNA was extracted from samples collected at 0, 4, 24, 36 h after treatment with NAD+ for snap bean. The pathogen inoculation was carried out at 24 h. Mock treatment with water was included as the control.

Funding

U.S. Department of Agriculture, AWD03827

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-06-20

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA851063

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA851063 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Phaseolus vulgaris eEukaryotes genome sequencing and assembly raw sequence reads genome sequencing assembly

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