Table 1 prophage regions on main chromosome.xlsx (12.12 kB)
Predicted A. nasoniae phage regions on the main chromosome, as estimated by PHASTER
dataset
posted on 2022-04-07, 11:55 authored by Crystal L. Frost, Stefanos SioziosStefanos Siozios, Pol Nadal-Jimenez, Michael Brockhurst, Kayla King, Alistair DarbyAlistair Darby, Greg HurstGreg HurstPredicted regions of phage origin on the A.nasoniae main chromosome as estimated by PHASTER (Arndt et al 2016).
Column 1: Region identifier
Column 2: Length of region, kb
Column 3: PHASTER estimate of completeness (score)
Column 4: Position on chromosome
Column 5: Estimated # of protein coding ORFs in region
Column 6: Estimated # of ORFs encoding core phage proteins
Column 7: Estimated # of proteins classed as Hypothetical function
Column 8: Estimated # of proteins classed as bacterial in origin (rather than phage core).
Column 9: Presence/Absence of an attachment site
Column 10: Identity of 3' Flanking ORF
Column 11: Identity of 5' Flanking ORF
Column 12: Number of nanopore long reads covering phage region
Column 13: Length of longest read covering phage region.
Arndt D, Grant JR, Marcu A, Sajed T, Pon A, Liang Y, Wishart DS. 2016. PHASTER: a better, faster version of the PHAST phage search tool. Nucleic Acids Res 44:W16–W21.
