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Phytophthora ramorum EU1 genome sequencing and assembly

dataset

posted on 2024-06-11, 06:42 authored by USDA ARS

Phytophthora ramorum is the causal agent of sudden oak death in West Coast forests and currently two clonal lineages, NA1 and EU1, cause epidemics in forests. We report two high-quality genomes of individuals belonging to the NA1 and EU1 clonal lineages respectively, using PacBio long-read sequencing. These high-quality genomes provide a valuable resource in understanding the genetics, evolution, and adaptation of these two colonial lineages. This project contains the Primary (principal) assembly for EU1 isolate PR-15-019.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-07-15

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

Biological Sciences; biotechnology; genetics

Pending citation

Public Access Level

Public

Accession Number

PRJNA746988

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA746988 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Biological Sciences biotechnology genetics

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