Table 4.xls (9.5 kB)

Phylogenetic observations of the minimum spanning tree topology built from cgSNV analysis of 145 S. Heidelberg isolates and comparison of draft and closed genomes as references.

dataset

posted on 2018-02-05, 18:36 authored by Valentine Usongo, Chrystal Berry, Khadidja Yousfi, Florence Doualla-Bell, Genevieve Labbé, Roger Johnson, Eric Fournier, Celine Nadon, Lawrence Goodridge, Sadjia Bekal

Phylogenetic observations of the minimum spanning tree topology built from cgSNV analysis of 145 S. Heidelberg isolates and comparison of draft and closed genomes as references.

History

Usage metrics

Read the peer-reviewed publication

Impact of the choice of reference genome on the ability of the core genome SNV methodology to distinguish strains of Salmonella enterica serovar Heidelberg

PLOS ONE

Categories

Keywords

core genome SNV methodology Salmonella enterica serovar Heidelberg Salmonella enterica serovar Heidelberg nucleotide variant pipeline outbreak sequence typing methods reference genome

Licence

Exports