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Nematostella vectensis transcriptome and gene models v2.0

Version 3 2022-02-13, 19:02
Version 2 2020-09-26, 20:21
Version 1 2013-09-25, 11:40
posted on 2022-02-13, 19:02 authored by David FredmanDavid Fredman, Michaela Schwaiger, Fabian Rentzsch, Ulrich Technau

The gene models, transcripts and other derived data were generated from a comprehensive transcriptome survey of samples taken from five embryonic stages, adult female, and adult male samples. In total 1.6 billion 76-100 bp pair-end reads were obtained. The reads were mapped onto the N. vectensis genome v1.0, and new gene models were constructed using the RNA-seq evidence with the Augustus gene caller. These RNA-seq evidence based gene models are identified by a NVE prefix.