Methods for analyzing, comparing and correcting gene families

Yeast (YGOB) and legume gene families used for testing methods for detecting and correcting under-clustered and over-clustered gene families

ygob_proteomes.tar.gz: Complete yeast proteomes from YGOB database

ygob_family_fasta.tar.gz: Complete yeast families from the YGOB database

ygob_family_fasta_delete.tar.gz: Intentionally under-clustered yeast families with missing 20% sequences

ygob_family_fasta_insert_delete.tar.gz:
Intentionally under-clustered yeast families with missing 20% sequences and containing 20% of wrong sequences

orthofinder_ygob_family_fasta.tar.gz: Yeast families built using OrthoFinder

legume_proteomes.tar.gz: Complete legume proteomes used for testing the under-clustering detection and correction method

legume_outgroup_proteomes.tar.gz: Complete legume outgroup proteomes used for detection of over-clustering in legume families built using OrthoFinder

orthofinder_legumes_family_fasta.tar.gz: Legume families built using OrthoFinder