Interproscan annotation

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Annotation list for Calanus finmarchicus reference transcriptome using InterProScan⁴.

Contigs were processed with InterProScan⁴ to scan InterProScan signatures. A GO was assigned to each contig with an InterProScan hit containing a GO annotation.

Interprot_annot_206K.tsv is the annotation list for Calanus finmarchicus reference transcriptome using InterProScan⁴ (a GO annotation was attributed to 65,924 contigs out of the 206,012).

Interprot_annot_206K.gff3 is the annotation list for the 76,550 contigs expressed with more than 1 CPM in the RNA sequencing Bioproject PRJNA628886 using InterProScan⁴ (a GO annotation was attributed to 33,057 contigs out of the 76,550).

⁴InterProScan: version 5.29-68.0, --goterms -t n -dp -f TSV, gff3 parameters.

Ref: Jones, P. et al. InterProScan 5: genome-scale protein function classification. Bioinformatics 30, 1236–1240 (2014).

Related to bioproject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA628886