Input files from the ORF annotation programs (zip file) - Comparative analysis of gene prediction tools for viral genome annotation

The file "Inputfiles_from_ORF_annotation_programs.zip" contains all output files for the different ORF calling programs tested (i.e. AUGUSTUS with the three different models (Human, S. aureus and E. coli), FragGeneScan, GeneMarkS, Glimmer, MGA, MetaProdigal, PHANOTATE, Prodigal). These files were used as the first input file to count the number of true positives (TP), false positives (FP) and false negatives (FN) via "coordinateschecker.py". It is important to highlight the type file in the script before running it, as not all programs offer the same output type.

These files should be decompressed before using it in any of these scripts.