Genotype specific transcriptome assemblies - Evaluation metrics

dataset

posted on 2022-02-11, 19:15 authored by Diego Mauricio Riano PachonDiego Mauricio Riano Pachon, Felipe PeresFelipe Peres

Genotype-specific de novo transcriptome assemblies from sugarcane RNASeq public datasets. Quality metrics with BUSCO and TransRate. Comparative metrics in TransRate were computed against the Sorghum bicolor transcriptome.

Funding

FAPESP - 2019/24796-5

CNPq - 310080/2018‐5

History

Usage metrics

Keywords

transcriptomics bioinformatics conserved genes BUSCO TransRate quality de novo assembly Plant Cell and Molecular Biology Plant Biology Bioinformatics

Licence

CC BY 4.0

Exports

RefWorks

BibTeX

Ref. manager

Endnote

DataCite

NLM