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Genotype determination performance.

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posted on 2021-08-02, 17:39 authored by Wesley M. Marin, Ravi Dandekar, Danillo G. Augusto, Tasneem Yusufali, Bianca Heyn, Jan Hofmann, Vinzenz Lange, Jürgen Sauter, Paul J. Norman, Jill A. Hollenbach

Genotype determination performance table comparing the genotypes determined by PING to the validation genotypes for each dataset. Possible outcomes are ‘Match’, where the determined component allele matches the validation allele, ‘Mismatch’, where the determined component allele does not match the validation allele, or ‘Unresolved’, where PING was unable to determine a genotype, but the validation allele was not marked as unresolved. The coloring signifies concordance level, where green is 0–10% discordant, yellow is 10–15% discordant, and red is over 15% discordant.

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