GWAS/GS data files

dataset

posted on 2021-08-05, 14:57 authored by Alexandra McCartyAlexandra McCarty

Filtered SNP data for four F2 families exposed to an acute low salinity challenge.

File used in TASSEL GWAS: FilteredSNPs.vcf

File used for GS analysis in BGLR: GWAS_GS_markers.vcf

The vcf file (GWAS_GS_markers.vcf) was converted to .bed format using PLINK for easier upload into BGLR: GS_markers.bed, GS_markers.fam, GS_markers.bim

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SNPs genome GS GWAS BGLR TASSEL Quantitative Genetics (incl. Disease and Trait Mapping Genetics)Genomics Genetics

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