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Figures on Identification of CNL Disease Resistance Genes in Aegilops tauschii coss. (Poaceae)

Version 2 2019-02-26, 22:12
Version 1 2019-02-22, 05:39
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posted on 2019-02-26, 22:12 authored by Madhav NepalMadhav Nepal, Ethan Andersen, Samantha Shaw

Figure 1. Phylogenetic analysis of the CNL genes of Aegilops tauschii and their orthologs in Arabidopsis thaliana. The tree was constructed using the JTT+G model with 100 bootstrap replicates. CNL clades A, B, C, and D are shown with blue, pink, red, and green symbols, respectively.


Figure 2. Phylogenetic analysis of the CNL genes of Aegilops tauschii and their orthologs in Oryza sativa. The tree was constructed using the JTT+G model with 100 bootstrap replicates. A. tauschii and O. sativa genes are shown with red and blue symbols, respectively.


Figure 3. MEME analysis of the 402 Aegilops tauschii genes. The block diagrams show the character­istics three motifs used to identify CNL genes (P-Loop, Kinase-2, and GLPL) along with other highly prevalent motifs, split according to clade as shown by the tree (lower right) color-coded to represent the domain compositions in Figure 1. CNL-B, A, C1, C2, C3, and C4 are colored pink, blue, brown, green purple, and red, respectively


Figure 4. Exon content of the 402 Aegilops tauschii genes showing splice locations between exons (gray bars) and introns (dashed lines).

Funding

USDA-NIFA Hatch Project SD00H469-13 Fund to M. Nepal

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