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example-with-provided-ldref.R (4.39 kB)
.RDS
LD_chr1.rds (720.06 MB)
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LD_chr2.rds (756.61 MB)
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LD_chr3.rds (651.99 MB)
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LD_chr4.rds (537.22 MB)
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LD_chr5.rds (565.8 MB)
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LD_chr6.rds (810.23 MB)
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LD_chr7.rds (488.94 MB)
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LD_chr8.rds (496.21 MB)
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LD_chr9.rds (381.55 MB)
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LD_chr10.rds (477.2 MB)
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LD_chr11.rds (464.08 MB)
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LD_chr12.rds (431.44 MB)
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LD_chr13.rds (335.29 MB)
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LD_chr14.rds (272.31 MB)
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LD_chr15.rds (235.36 MB)
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LD_chr16.rds (201.05 MB)
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LD_chr17.rds (174.37 MB)
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LD_chr18.rds (230.89 MB)
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LD_chr19.rds (98.64 MB)
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European LD reference

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Version 3 2020-11-16, 17:50
Version 2 2020-11-16, 17:27
Version 1 2020-10-01, 14:08
dataset
posted on 2020-11-16, 17:50 authored by Florian PrivéFlorian Privé
LD reference (correlations between pairs of genetic variants) for 1,054,330 HapMap3 variants based on 362,320 European individuals of the UK biobank.

Pairs of variants further than 3 cM apart are assumed to have 0 correlation.

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    LD referenceLDpred2Genetics

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    CC BY 4.0

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