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DEG_analysis_OPM.xlsx (4.16 MB)

Differential gene expression analyses between larval stages of the oak processionary moth (Thaumetopoea processionea).

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posted on 2024-03-04, 10:02 authored by Johan ZicolaJohan Zicola, Prasad Dasari, Katharina Ziese-Kubon, Armin Meurer, Timo Buhl, Stefan ScholtenStefan Scholten

Differential expressed genes between each stages was performed, in addition to a comparison between the non-allergenic stage L2 and the allergenic stages L4 and L5 using DESeq2 R package. Log fold change shrinkage was performed using the apelgm R package. The lists of differentially expressed genes with an adjusted p-value below 5% for each comparison were summarized for each comparison in this Excel spreadsheet.

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