Datasets

dataset

posted on 2020-12-10, 14:45 authored by Bastian EichenbergerBastian Eichenberger, YinXiu Zhan

The benchmarking datasets used for deepBlink. The npz files contain train/valid/test splits inside and can be used directly. The files belong to the following challenges / classes:

- ISBI Particle tracking challenge: microtubule, vesicle, receptor

- Custom synthetic (based on http://smal.ws): particle

- Custom fixed cell: smfish

- Custom live cell: suntag

The csv files are to determine which image in the test splits correspond to which original image, SNR, and density.

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Deep-learning dataset download benchmark datasets image-analysis tool Computational Biology

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