Data from manuscript "Method of place cell classification determines the population of cells identified".
Each zip file is one session, with the filename indicating the mouse name and the date of recording (i.e. mouse_date.zip). Each zip file contains a mat-file called 'Fall.mat'. This was generated by using Suite2P1 on the recordings, which were recorded at 7.51 fps. Within this, F represents the fluorescence traces (ROIs by timepoints), and Fneu represents the neuropil fluorescence traces (ROIs by timepoints). We calculated the fluorescence using: F-0.7*Fneu. For more information on the Suite2P outputs see: https://suite2p.readthedocs.io/en/latest/outputs.html
The zip files also contain a mat-file called 'locomotion.mat'. This contains the location trace for each session, scaled between 0-1. The length of the track was 200 cm, so in order to get the location in cm, one can simply do: loco * 200.
1. Pachitariu, Marius, et al. "Suite2p: beyond 10,000 neurons with standard two-photon microscopy." Biorxiv (2017).
Funding
Non-local computations in hippocampal circuits: neural mechanisms