Appendix 4.3.4: MEME selected site analysis

After identification of the selected branch via the aBSREL method, we turned to the MEME method within the HyPhy program (v2.3.11)<a href="https://paperpile.com/c/fHp9OK/tJCz">[235]</a>, to identify those sites which may have adaptively evolved. We tested the branch leading to EAncLuc, which was identified as under selection in the aBSREL analysis. A single partition was recovered with 25 sites under episodic diversifying positive selection at p <= 0.1.<br><br>