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REP-PCR patterns and representative dendrogram.

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posted on 2013-02-07, 00:47 authored by Jeffrey W. Turner, Rohinee N. Paranjpye, Eric D. Landis, Stanley V. Biryukov, Narjol González-Escalona, William B. Nilsson, Mark S. Strom

The electrophoresis banding patterns of 167 V. parahaemolyticus isolates assayed by REP-PCR is shown. BioNumerics analysis of patterns revealed 39 unique REP-PCR groups comprised of N isolates. The corresponding BioNumerics dendrogram illustrates the genetic relatedness between REP-PCR groups, which we grouped into three major clusters (I, II, III). Groups 27, 28 and 3 comprise cluster I while groups 11, 29 and 34 comprise cluster III and all remaining groups comprise cluster II. Electrophoresis banding patterns shown with scale indicating fragment size in base pairs (bp).

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