Polymorphism summary and test for multilocus linkage disequilibrium in <i>Venturia inaequalis</i> samples.

a<p>sample size.</p>b<p>number of haplotypes.</p>c<p>clonal fraction.</p>d<p>allelic richness.</p>e<p>expected heterozygosity <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0001455#pone.0001455-Nei2" target="_blank">[56]</a>.</p>f<p>unique allele richness.</p>g<p>for each sample, values (±standard deviation) are averaged across loci and across 100 resampled datasets of 12 individuals.</p>h<p>index of association <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0001455#pone.0001455-Brown3" target="_blank">[59]</a>. The null hypothesis of random association of alleles (<i>I<sub>A</sub></i> = 0), consistent with random mating, was tested using the program Multilocus<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0001455#pone.0001455-Agapow1" target="_blank">[60]</a> by comparing the observed value of the statistic to that obtained after 1000 randomization to simulate recombination.</p>