Fig_1.tif (972.32 kB)
Phylogenetic clustering of SDDV within the Iridoviridae family.
figure
posted on 2015-08-07, 04:42 authored by Ad de Groof, Lars Guelen, Martin Deijs, Yorick van der Wal, Masato Miyata, Kah Sing Ng, Lotte van Grinsven, Bartjan Simmelink, Yvonne Biermann, Luc Grisez, Jan van Lent, Anthony de Ronde, Siow Foong Chang, Carla Schrier, Lia van der HoekDeduced amino acid sequences of 26 conserved genes (see S2 Table) were aligned with the corresponding genes of Iridoviridae of which the full length genome sequence is available. The genes of each virus are placed in the same order and the total was used for phylogenetic analysis, similar as described by Eaton et al. [9]. The neighbor-joining method with pairwise deletion within the MEGA-5 package was used, bootstrap values (for 500 replications) are provided at the root of the clusters and the scale bar is a measure of the proportion of divergence. SDDV is indicated with • in the tree.
