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Genome atlas view of the scaffolded contigs of L. pentosus KCA1.

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posted on 2013-03-20, 12:51 authored by Kingsley C. Anukam, Jean M. Macklaim, Gregory B. Gloor, Gregor Reid, Jos Boekhorst, Bernadet Renckens, Sacha A. F. T. van Hijum, Roland J. Siezen

From the outer circle inward: The first ring shows the entire chromosome. The second ring shows the location of the 83 contigs based on L. plantarum WCFS1 genome order/orientation as template. The black arrow-heads indicates the position of some of the genes of interest located in the corresponding contigs described in the text with the locus tag in bracket. The fourth ring shows the local %GC plot and the innermost circle shows the GC-skew with sharp changes occurring at the origin and terminus of replication. The Atlas was constructed using DNA plotter.

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