Fig_1.tif (771.49 kB)
General characteristics of the presented TF predictions and quality control.
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posted on 2015-09-04, 03:04 authored by Marco Galardini, Matteo Brilli, Giulia Spini, Matteo Rossi, Bianca Roncaglia, Alessia Bani, Manuela Chiancianesi, Marco Moretto, Kristof Engelen, Giovanni Bacci, Francesco Pini, Emanuele G. Biondi, Marco Bazzicalupo, Alessio Mengonia) Information content frequencies for the 41 analysed TFs: vertical line indicates the minimum information content, as measured for S. meliloti strain Rm1021; b-c) comparison between TFBS predictions and the reported experimental results in strain Rm1021: the dashed horizontal line indicates the mean value for the TFs with information content higher than the minimum value; d) correlations with the COLOMBOS expression compendium for S. meliloti Rm1021; e) correlation between the TFs information content and the signal-to-noise ratio, measured as the proportion of prediction in genes upstream regions over the total number of predictions: vertical bars indicate the error level measured in all the strains.
