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454 read coverage across the HIV-1 genome.

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posted on 2013-09-05, 03:50 authored by Shyamala Iyer, Heather Bouzek, Wenjie Deng, Brendan Larsen, Eleanor Casey, James I. Mullins

Locations of the gag, env and nef genes evaluated in this study are shown. A total of 26,620 reads mapped to gag, 48,927 to env and 21,963 to the nef gene. Reads were aligned to a sample-specific consensus using MOSAIK (http://bioinformatics.bc.edu/marthlab/Mosaik).

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