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Transcript patterns across six different S. glomerata tissues.
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posted on 2016-06-03, 11:24 authored by Nicole G. Ertl, Wayne A. O’Connor, Alexie Papanicolaou, Aaron N. Wiegand, Abigail ElizurA) non-normalised and non-strand specific tissue reads were mapped to the combined reference transcriptome and b) strand-specific and normalised tissue reads were mapped to the strand-specific reference transcriptome, using CLC Workbench version 7.5. Graph shows the number of transcripts that are common across individual tissue patterns, with 1 standing for “transcript present in tissue” and 0 for “transcript not present in tissue”. The order in which the tissues are listed is as follows: haemolymph (closest to the x-axis label), gill, mantle, muscle, gonad and digestive. The respective top graphs show the full-scale graph, with the respective lower graphs emphasising the fine scale features of the same graph by adding a graph break.
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Sydney Rock Oysterthroughput sequencingtranscripts codingantioxidant defence mechanismglomerata ORFsheat shock proteinsprotein levelmarine animalsSaccostrea glomerataTranscriptome AnalysisTLR adaptors MALantioxidant proteinswater qualityoyster speciesgigas genomeglomerata tissuessystem componentsMolluscan Immunity Background OystersTRAMoyster immunitytissue expression patternEnvironmental stressorsresearch topicnucleotide levelapoptosis pathwaysTRIFpattern recognition receptorswater column
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