Supplement 1. Supertree phylogeny files and taxonomic list.

<h2>File List</h2><blockquote> <table> <tbody><tr> <td><a href="sdlphy_phylo.new">sdlphy_phylo.new</a> </td> <td>- Supertree in <a href="http://evolution.gs.washington.edu/phylip/newicktree.html">Newick</a> format.</td> </tr> <tr> <td> </td> <td> </td> </tr> <tr> <td><a href="sdlphy_phylo.nex">sdlphy_phylo.nex</a> </td> <td>- Supertree in Nexus format.</td> </tr> <tr> <td> </td> <td> </td> </tr> <tr> <td><a href="sdlphy_taxa.txt">sdlphy_taxa.txt</a></td> <td> - Table of taxa.</td> </tr> </tbody></table> <p> </p></blockquote><h2>Description</h2><blockquote> <p>sdlphy_phylo.new, sdlphy_phylo.nex: These files contain the supertree (in different formats) that was used to generate the results in this paper. The tree was assembled using <a href="http://www.phylodiversity.net/phylomatic">Phylomatic</a> megatree R20040402 (backbone derived from Peter Stevens' <a href="http://www.mobot.org/MOBOT/research/APweb">APweb</a>), and branch lengths were adjusted using the BLADJ algorithm of <a href="http://www.phylodiversity.net/phylocom">Phylocom</a> (Webb, Ackerly, Kembel). The tree contains internal node names, and follows standard Newick and Nexus conventions (see Maddison et al. 1997. Syst. Bio. 46:590–621). The Nexus tree opens in MacClade v4.05 and Mesquite v1.05.<br> <br> sdlphy_taxa.txt: Table of the codes used in the phylogeny files. TAB-delimined plain text; UNIX line endings; first row contains column names.</p> </blockquote>