Strain-specific annotation files for data in File S4 from Linheiro & Bergman 2012

2014-09-15T09:45:52Z (GMT) by Casey Bergman Raquel Linheiro

Data in File S4 from Linheiro & Bergman 2012 are merged across all strains in the DGRP sample. This archive provides .bed files for individual strains with read support in the score field. The strain-specific data here are based on the revised Illumina dataset from Linheiro & Bergman 2012 posted here:

The union of these strain specific .bed files differs slightly from the merged .bed file corresponding to File S4 because of overlapping TE insertions sites. In the merging process, 3 TE insertion sites supported by a total of 23 reads were eliminated.