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Single-cell RNA-seq data from Smart-seq2 sequencing of FACS sorted cells (v2)

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Version 8 2018-09-20, 17:47
Version 7 2018-03-27, 19:58
Version 6 2018-03-23, 18:08
Version 5 2018-03-22, 19:06
Version 4 2018-03-09, 19:35
Version 3 2018-02-20, 22:05
Version 2 2018-02-16, 20:02
Version 1 2018-01-27, 00:58
dataset
posted on 2018-01-27, 00:58 authored by Tabula Muris Consortium
Gene-count tables for FACS sorted cells sequenced with Smart-Seq2 from 20 organs of 7 mice. Cells are grouped by tissue of origin.

Includes data for 53,760 cells, 44,879 of which passed a QC cutoff of at least 500 genes and 50,000 reads.

Cell annotations using the Cell Ontology [1] controlled vocabulary are in a separate csv.

This differs from v1 by renaming "Brain_Neurons" --> "Brain_Non-microglia" to be consistent with the manuscript.

[1] http://purl.obolibrary.org/obo/cl.owl

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Chan Zuckerberg Biohub

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    Mus musculusrna-seqsingle-cell rna-seqsingle-cell RNA-seqaortabladderbrainmicroglianeuroncolondiaphragmfatheartkidneyliverlungmammarymarrowmusclepancreasskinthymustonguetracheaAnimal Cell and Molecular BiologyBioinformaticsCell BiologyMolecular Biology

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