Simulated-Metagenome.xlsx

2018-10-25T01:12:28Z (GMT) by Raphael Eisenhofer Philipona
<div>List of microbial genomes used to construct the simulated metagenome used in an upcoming study. Simulated metagenomes were constructed using gargammel:</div><div><br></div><div>#empirical ancient DNA distribution:<br>./gargammel.pl --comp 1,0,0 -n 1500000 --loc 4 --scale 0.3 -briggs 0.03,0.25,0.01,0.5 MEGAN-MALT-benchmark-plus-Ecoli/ -o Euk-DB-Contam/<br><br>#100bp fragments:<br>./gargammel.pl --comp 1,0,0 -n 1500000 --l 100 -briggs 0.03,0.25,0.01,0.5 MEGAN-MALT-benchmark-plus-Ecoli/ -o Euk-DB-Contam/100bp<br></div>

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