SFF and Mapping files for demultiplexing

The provided mapping files contain the barcode and linker primer sequences that were used for sample-wise indexing in 454 pyrosequencing. This information was used to demultiplex the raw pooled sequencing data (provided here as .sff files) into the FASTQ-format files for each sample that are available through the European Nucleotide Archive (ENA) at the European Bioinformatics Institute (EBI) under accession number PRJEB25221.

Reference

Ingham AC, Kielsen K, Cilieborg MS, Lund O, Holmes S, Aarestrup FM, Müller KG, and Pamp SJ. (2019) Specific gut microbiome members are associated with distinct immune markers in pediatric allogeneic hematopoietic stem cell transplantation. Microbiome 7:131 https://doi.org/10.1186/s40168-019-0745-z