1/1
PopSV Data/Scripts
Version 2 2019-09-13, 05:09
Version 1 2018-11-01, 23:53
dataset
posted on 2019-09-13, 05:09 authored by Jean MonlongJean MonlongThe data to reproduce all graphs/tables are deposited here.
The full catalog, i.e. all the calls from the three datasets, were merged in 'CNV-PopSV-Twin_CageKid_GoNL-germline.tsv' for the germline CNVs and 'CNV-PopSV-CageKid-somatic.tsv' for the somatic CNVs.
The full catalog, i.e. all the calls from the three datasets, were merged in 'CNV-PopSV-Twin_CageKid_GoNL-germline.tsv' for the germline CNVs and 'CNV-PopSV-CageKid-somatic.tsv' for the somatic CNVs.
The regions with novel CNVs (as defined in the paper) are listed in 'CNV-novel-notTGP.tsv'. The count/freq columns correspond to the frequency in our cohort.
See https://github.com/jmonlong/reppopsv for more information.
Also http://jmonlong.github.io/PopSV/6-Publication.md/
