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Oral microbiome gene catalog gene cluster file, 50% amino acid identity

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posted on 16.04.2019, 19:12 by Braden Tierney
Gene clusters for non-redundant microbial gene catalog (clustered at 50% sequence identity) from 1,473 oral microbiome shotgun metagenomic samples.

This is one of two raw output files from CD-HIT. Each cluster is marked in the left column with a ">," and there is one cluster per consensus genes in the gene catalog files. The ID's in the right column are the genes within a cluster, with the consensus gene marked with an asterisk. Percent identity to the consensus gene is also described per gene ID.

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