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Nematostella vectensis transcriptome and gene models v2.0

dataset
posted on 26.09.2020 by David Fredman, Michaela Schwaiger, Fabian Rentzsch, Ulrich Technau

The gene models, transcripts and other derived data were generated from a comprehensive transcriptome survey of samples taken from five embryonic stages, adult female, and adult male samples. In total 1.6 billion 76-100 bp pair-end reads were obtained. The reads were mapped onto the N. vectensis genome v1.0, and new gene models were constructed using the RNA-seq evidence with the Augustus gene caller. These RNA-seq evidence based gene models are identified by a NVE prefix.

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