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gene_catalog_oral_gut_95_nucl.gz (7.65 GB)

Merged oral and gut gene catalog, consensus sequences (95% identity)

Version 2 2019-05-23, 22:16

Version 1 2019-05-23, 21:57

dataset

posted on 2019-05-23, 22:16 authored by Braden TierneyBraden Tierney

Non-redundant microbial gene catalog (clustered at 95% sequence identity) from 1,473 oral microbiome and 2,182 gut microbiome shotgun metagenomic samples.

This is one of two raw output files from CD-HIT. It is a fasta file containing the sequences of the consensus genes – the longest genes in each cluster – as well as their ID's. These ID's map back to the second CD-HIT output file, the cluster (extension: .clstr) file.