Manhattan plots for six fruit quality traits in 78 apple cultivars using GLM.

<p>Instrumental traits include SSC. Sensory traits include <i>fresh green apple</i>, <i>skin thickness</i>, <i>juicy</i>, <i>crisp</i> and <i>mealy</i>. The most significant SNPs with repeated effects are indicated with black arrows; the 5% FDR is indicated by the horizontal line in each panel.</p>