MOESM2 of Chicken interferome: avian interferon-stimulated genes identified by microarray and RNA-seq of primary chick embryo fibroblasts treated with a chicken type I interferon (IFN-α)

Additional file 2. Detailed information on ChISGs identified by RNA-seq, and microarray technologies (1). Technologies identifying significant IRGs are listed as “1” RNA-seq (using Kal’s Z test); “2” Affymetrix 32K GeneChip Chicken Genome Array and “3” Chicken Gene 1.0 ST Array’. ChISGs significant by one or both microarrays and RNA-seq using Kal’s Z test under relaxed criteria (FC > 2.5 or FDR < 0.05) are indicated by “(1)”. “+” after the technology identifier indicates that IFN-induced RNA-seq read density was observed at the location of the unannotated gene. (2) Interferome status [45]. (3) Human homologue data (HUGO) [46]. (4) Mouse orthologue data (MGI) [47].