Idiotope_prediction_dataset.csv (134.5 MB)

Idiotope prediction dataset

Download (269.01 MB)
dataset
posted on 19.09.2017 by Rune Alexander Høglund, Andreas Lossius, Jorunn N. Johansen, Jane Homan, Jūratė Šaltytė Benth, Harlan Robins, Bjarne Bogen, Robert Bremel, Trygve Holmøy
This dataset contains deduced amino acid IGHV sequences from B cells of 11 MS and 6 OIND patients (Johansen et al), collected from blood and CSF. Immunosequencing by Adaptive Biotechnologies using the ImmunoSeq survey level assay. Non-productive sequences were removed. The nucleotide sequences were translated to amino acid sequences using IMGT/High V-Quest (Alamyar et al). IGHV sequences deduced from transcripts comprising more than 0.5% of the reads were designated "highly transcribed".

Funding

The study was supported with a grant from the Norwegian Research Council (FriMedBio) (grant/project number 250864) and Akershus University Hospital internal strategic funds.

History

Licence

Exports

Licence

Exports