Version 2 2018-01-26, 08:00Version 2 2018-01-26, 08:00
Version 1 2017-12-31, 11:55Version 1 2017-12-31, 11:55
dataset
posted on 2018-01-26, 08:00authored byEmily Bailes, Kaitlin R Deutsch, Judy Bagi, Lucila Rondissone, Mark BrownMark Brown, Owen T Lewis
Supporting data for "First detection of bee viruses in hoverfly (syrphid) pollinators" (accepted subject to minor revisions in Biology Letters, 2018)
Bailesetal_HoverflyScreening.xlsx Information on the samples screened for viruses and the viruses detected and the NCBI sequences relating to individual samples
Bailesetal_qRTPCR.xlsx qRT-PCR data for SBV and BQCV titres, including Ct values, in honey bees and hoverflies
Bailesetal code.R R code used for analysing differences in viral titres and viral presence/absence between honey bees and hoverflies
Bailesetal_SBV-clustal-alignment.txt Alignment of SBV sequences from Clustal Omega
Bailesetal_BQCV-clustal-alignment.txt Alignment of BQCV sequences from Clustal Omega
.abi files Sequences traces are named SeqID_Virus_SampleID.abi - NVBI seqeuence IDs that relate to the sequencing trace are given in Bailesetal_HoverflyScreening.xlsx - The higher quality 3' end of S1_SBV_Am7_2_3primeend.ab1 was used to extend the sequence of S15_SBV_Am7_2.ab1 - Sequence B9B_BQCV_Ea20_pGEM.ab1 is cloned into pGEM and sequenced from the M13F site, it is in reverse orientation.
Funding
John Fell OUP Research Fund grant 152/061, BBSRC grant BB/N000668/1