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E coli strain MEEI01 simulated reads

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posted on 2018-05-21, 04:54 authored by Shane HogleShane Hogle
Simulated Illumina reads from E coli MEEI01 genome. Simulation performed using ART - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3278762/

Read length = 250bp
Fold coverage (sequencing depth) = 200
Mean insert size = 600bp
Standard deviation of insert size = 10

`art_illumina -i MEEI01.fna -l 250 -p -f 200 -m 600 -s 10 -o paired_dat`

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