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De novo genome assemblies of Neurospora tetrasperma based on Illumina HiSeq reads
dataset
posted on 2017-08-21, 07:44 authored by Yu Sun, Pádraic Corcoran, Jesper SvedbergJesper Svedberg, Hanna JohannessonThis dataset contains 92 de novo genome assemblies of Neurospora tetrasperma, together with one assembly of a N. hispaniola genome (8817) and one assembly of a N. sitophila genome (1135). The genomes were assembled using SOAPdenovo.
Raw reads have been deposited in the Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) in BioProjects PRJNA238188 (paired-end reads) and PRJNA239947 (matepair reads for four of the genomes).
All strains can be ordered from the Fungal Genetics Stock Center (FGSC) at http://www.fgsc.net.
For further information on the strains and the genome assemblies, please see:
Raw reads have been deposited in the Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) in BioProjects PRJNA238188 (paired-end reads) and PRJNA239947 (matepair reads for four of the genomes).
All strains can be ordered from the Fungal Genetics Stock Center (FGSC) at http://www.fgsc.net.
For further information on the strains and the genome assemblies, please see:
Corcoran, P., Anderson, J.L., Jacobson, D.J., Sun, Y., Ni, P., Lascoux, M., and Johannesson, H. (2016). Introgression maintains the genetic integrity of the mating-type determining chromosome of the fungus Neurospora tetrasperma. Genome Res.
Sun, Y., Whittle, C.A., Corcoran, P., and Johannesson, H. (2015). Intron evolution in Neurospora: the role of mutational bias and selection. Genome Res. 25, 100–110.
Sun, Y., Svedberg, J., Hiltunen, M., Corcoran, P., and Johannesson, H. (In press). Large-scale suppression of recombination predates genomic rearrangements in Neurospora tetrasperma.
