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Cryoconite Holes Sequencing Data
This repository contains sequencing data for my paper "Island Biogeography of Cryoconite Hole Bacteria in Antarctica's Taylor Valley and Around the World" (Darcy et al. 2018). This data set includes all the sequencing data that were generated as part of the paper, i.e. the sequences from canada, commonwealth, and taylor glaciers, as well as hole locations and measurements.
Sequence was done with illumina paired-end technology. reads for r1 and r2 are demultiplexed separately and can be found in r1.tar.gz and r2.tar.gz. metadata for these samples is included as metadata.txt.
This repository doesn't include copies of data from other studies as part of my paper's global meta analysis. Please see the file global_metadata.txt which includes SAMIDs/ERSIDs that can be used to fetch those data from the ENA (https://www.ebi.ac.uk/ena/browser/home) or SRA (https://www.ncbi.nlm.nih.gov/sra).
Sequence was done with illumina paired-end technology. reads for r1 and r2 are demultiplexed separately and can be found in r1.tar.gz and r2.tar.gz. metadata for these samples is included as metadata.txt.
This repository doesn't include copies of data from other studies as part of my paper's global meta analysis. Please see the file global_metadata.txt which includes SAMIDs/ERSIDs that can be used to fetch those data from the ENA (https://www.ebi.ac.uk/ena/browser/home) or SRA (https://www.ncbi.nlm.nih.gov/sra).
