figshare
Browse
12204RADsFinal.txt (2.48 MB)

Brown trout (Salmo trutta) RAD data set of 12204 sequences each containing one or two SNPs, with minimum allele frequency of 5% or higher, no SNPs in the first or last 30 bp of the RAD, no unsequenced nucleotides, and which can be positioned on the S. trutta linkage map

Download (2.48 MB)
Version 2 2019-05-24, 13:02
Version 1 2019-05-24, 12:37
online resource
posted on 2019-05-24, 12:37 authored by Keoni Saint-PéKeoni Saint-Pé, Maeva Leitwein, Laurence Tissot, Nicolas Poulet, Bruno Guinand, Patrick Berrebi, Geoffrey Marselli, Jean-Marc Lascaux, Pierre-Alexandre Gagnaire, Blanchet SimonBlanchet Simon

This file contains for each RAD, identification (Locus_ID ), chromosome on Atlantic Salmon CHROMsalar), linkage group on the Brown trout linkage map (LG_Trutta),Position on the brown trout linkage group (Pos_cM_Trutta), positions on the Atlantic salmon chromosome (POSsalar_snp1, POSsalar_snp2), position of the SNP on the Rad tag (POStag_snp1, POStag_snp2), recombination rate ( recombination_rate_cM.Mb), sequence of the tag (TAG), sequencing direction (Orientation), and position of the rad (POS_RAD).

Funding

French Agency for Biodiversity (n° 136406)

Electricité De France (n°8619-5920011137)

History