Brown trout (Salmo trutta) RAD data set of 12204 sequences each containing one or two SNPs, with minimum allele frequency of 5% or higher, no SNPs in the first or last 30 bp of the RAD, no unsequenced nucleotides, and which can be positioned on the S. trutta linkage map
Version 2 2019-05-24, 13:02Version 2 2019-05-24, 13:02
Version 1 2019-05-24, 12:37Version 1 2019-05-24, 12:37
online resource
posted on 2019-05-24, 12:37authored byKeoni Saint-PéKeoni Saint-Pé, Maeva Leitwein, Laurence Tissot, Nicolas Poulet, Bruno Guinand, Patrick Berrebi, Geoffrey Marselli, Jean-Marc Lascaux, Pierre-Alexandre Gagnaire, Blanchet SimonBlanchet Simon
This file
contains for each RAD, identification (Locus_ID ),
chromosome on Atlantic Salmon CHROMsalar), linkage group on the Brown trout
linkage map (LG_Trutta),Position on the brown trout linkage group (Pos_cM_Trutta),
positions on the Atlantic salmon chromosome (POSsalar_snp1, POSsalar_snp2),
position of the SNP on the Rad tag (POStag_snp1, POStag_snp2), recombination
rate ( recombination_rate_cM.Mb),
sequence of the tag (TAG), sequencing direction (Orientation), and position of
the rad (POS_RAD).