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Base-pairing interactions at insertion sites of fished targetrons

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posted on 2011-12-30, 15:04 authored by Jun Yao, Jin Zhong, Alan M. Lambowitz

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Taken from "Gene targeting using randomly inserted group II introns (targetrons) recovered from an gene disruption library"

Nucleic Acids Research 2005;33(10):3351-3362.

Published online 9 Jun 2005

PMCID:PMC1148171.

© The Author 2005. Published by Oxford University Press. All rights reserved

Base-pairing interactions between the wild-type Ll.LtrB intron and its DNA target site are shown at the top. Numbers indicate the frequency (%) of each RNA/DNA base pair at each position for 36 fished targetrons and their insertion sites in the genome. The wild-type base pair at each position is boxed, and the percentage of Watson–Crick plus G/T or U/G wobble base pairs at each position is tabulated at the bottom.

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