Additional file 6: of Faecal microbiota characterisation of horses using 16 rdna barcoded pyrosequencing, and carriage rate of clostridium difficile at hospital admission

Microbiota faecal composition at species level (cumulative mean relative abundance >4 %) of C. difficile culture-positive and -negative horses. Samples 01, 03, 04, 09 and 10: C. difficile positive horses detected by faeces culture. Samples 02, 05, 06, 07 and 08: C. difficile negative horses detected by faeces culture. (DOCX 161 kb)