40168_2017_387_MOESM5_ESM.pdf (533.6 kB)
Additional file 5: of In-depth resistome analysis by targeted metagenomics
journal contribution
posted on 2018-01-15, 05:00 authored by Val Lanza, Fernando Baquero, José Martínez, Ricardo Ramos-Ruíz, Bruno González-Zorn, Antoine Andremont, Antonio Sánchez-Valenzuela, Stanislav Ehrlich, Sean Kennedy, Etienne Ruppé, Willem van Schaik, Rob Willems, Fernando de la Cruz, Teresa CoqueMGC abundance comparison of antibiotic resistance between swine and human samples. MGCs corresponding to the antibiotic resistance dataset were classified by antibiotic families (Agly: aminoglycosides, Bla: betalactams, Flq: fluoroquinolones, Gly: glycopeptides, MLS: macrolides, Phe: phenicols, Sul: sulfonamides, Tet: tetracyclines, Tmt: trimethoprim). Abundance was measured as read per kilobase per million reads. The right panel shows the results of MSS, and the left panel shows the results of ResCap. (PDF 533 kb)
