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Additional file 2: Figure S1. of De novo assembly of the complex genome of Nippostrongylus brasiliensis using MinION long reads
journal contribution
posted on 2018-01-11, 05:00 authored by David Eccles, Jodie Chandler, Mali Camberis, Bernard Henrissat, Sergey Koren, Graham Le Gros, Jonathan EwbankDot plots of all-against all sequence comparisons between the five most compressible VeCTR regions, based on minimum-distance alignments using LAST-align, created using LAST-dotplot. The names of the corresponding contigs and the coordinates of the plotted regions are indicated for each VeCTR and their unique flanking sequences. The longest of these five VeCTRs corresponds to 147 repeats of tRNA-Trp followed by 114Â bp of non-conserved sequence, while the shortest contains 90 copies of tRNA-Ser with 80Â bp of non-conserved sequence. (PDF 69 kb)