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Additional file 1: Figure S1. of Insights into the design and interpretation of iCLIP experiments

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posted on 2017-01-16, 05:00 authored by Nejc Haberman, Ina Huppertz, Jan Attig, Julian König, Zhen Wang, Christian Hauer, Matthias Hentze, Andreas Kulozik, Hervé Le Hir, Tomaž Curk, Christopher Sibley, Kathi Zarnack, Jernej Ule
Quality control of the PTBP1 and eIF4A3 iCLIP. Figure S2. CL-motifs are enriched at cDNA deletions and cDNA-starts in U2AF2-iCLIP. Figure S3. Analysis of cDNA-starts and cDNA-ends at the start of Y-tracts. Figure S4. Constrained cDNA-ends in eIF4A3 iCLIP. Figure S5. The impact of cDNA-end constraints on cDNA-starts in eIF4A3 iCLIP. Figure S6. Distribution of cDNA sizes in the studied experiments. (PDF 5.42 mb)

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European Research Council

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    Genome Biology

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    Keywords

    Protein–RNA interactionsiCLIPeCLIPirCLIPBinding site assignmentHigh-throughput sequencingPolypyrimidine tract binding protein 1 (PTBP1)Eukaryotic initiation factor 4A-III (eIF4A3)Exon-junction complex

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