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De novo assembly of Ensete ventricosum genome sequence

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posted on 2013-10-19, 23:58 authored by David StudholmeDavid Studholme

This file contains a de novo assembly of the Ensete ventricosum genome based on whole-genome shotgun sequencing by Illumina HiSeq paired reads and assembled using SOAPdenovo.

This assembly has, in part, been submitted to GenBank under accession number AMZH00000000.1 (http://www.ncbi.nlm.nih.gov/nuccore/AMZH00000000.1/). However, because of limitations on the number of supercontigs/contigs that GenBank will accept, we did not submit supercontigs and contigs of shorter than 5 kb. The raw data are available from the Sequence Read Archive under accession number SRX202265 (see http://www.ncbi.nlm.nih.gov/sra?LinkName=nuccore_sra_wgs&from_uid=440571971).

Data are described in this paper:

Harrison, J.; Moore, K.A.; Paszkiewicz, K.; Jones, T.; Grant, M.R.; Ambacheew, D.; Muzemil, S.; Studholme, D.J. A Draft Genome Sequence for Ensete ventricosum, the Drought-Tolerant “Tree Against Hunger”. Agronomy 2014, 4, 13-33.

 

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